Index

                 oscillation
                     biocycle
                         BOTH_001_gene_enrichment
                         BOTH_001_tfbs_enrichment
                         BOTH_01_gene_enrichment
                         BOTH_01_tfbs_enrichment
                         BOTH_05_gene_enrichment
                         BOTH_05_tfbs_enrichment
                         KO_001_gene_enrichment
                         KO_001_tfbs_enrichment
                         KO_01_gene_enrichment
                         KO_01_tfbs_enrichment
                         KO_05_gene_enrichment
                         KO_05_tfbs_enrichment
                         WT_001_gene_enrichment
                         WT_001_tfbs_enrichment
                         WT_01_gene_enrichment
                         WT_01_tfbs_enrichment
                         WT_05_gene_enrichment
                         WT_05_tfbs_enrichment
                     biocycle_old
                         01
                             BOTH_01
                                 chip_table
                                 chip_table2
                                 david_cluster
                                 david_enrichment
                                 enrich_tables
                                 tf_tables2
                             BOTH_01_gene_enrichment
                             KO_01_gene_enrichment
                             WT_01_gene_enrichment
                         001
                             BOTH_001
                                 chip_table
                                 chip_table2
                                 david_cluster
                                 david_enrichment
                                 enrich_tables
                                 tf_tables2
                             KO_001
                                 chip_table
                                 chip_table2
                                 david_cluster
                                 david_enrichment
                                 enrich_tables
                                 tf_tables2
                             WT_001
                                 chip_table
                                 chip_table2
                                 david_cluster
                                 david_enrichment
                                 enrich_tables
                                 tf_tables2
                             BOTH_001_gene_enrichment
                             KO_001_gene_enrichment
                             WT_001_gene_enrichment
                         05
                             BOTH_05
                                 chip_table
                                 chip_table2
                                 david_cluster
                                 david_enrichment
                                 enrich_tables
                                 tf_tables2
                             KO_05
                                 chip_table
                                 chip_table2
                                 david_enrichment
                                 enrich_tables
                                 tf_tables2
                             WT_05
                                 chip_table
                                 chip_table2
                                 david_enrichment
                                 enrich_tables
                                 tf_tables2
                             BOTH_05_gene_enrichment
                             KO_05_gene_enrichment
                             WT_05_gene_enrichment
                 quality
                     KO-12-1-Sequences_fastqc
                     KO-12-2-Sequences.txt.gz_trimmed_fastqc
                     KO-12-3-Sequences_fastqc
                     KO-12-4-Sequences.txt.gz_trimmed_fastqc
                     KO-12-5-Sequences_fastqc
                     KO-12-6-Sequences.txt.gz_trimmed_fastqc
                     KO-16-1-Sequences_fastqc
                     KO-16-2-Sequences.txt.gz_trimmed_fastqc
                     KO-16-3-Sequences_fastqc
                     KO-16-4-Sequences.txt.gz_trimmed_fastqc
                     KO-16-5-Sequences_fastqc
                     KO-16-6-Sequences.txt.gz_trimmed_fastqc
                     KO-20-1-Sequences_fastqc
                     KO-20-2-Sequences.txt.gz_trimmed_fastqc
                     KO-20-3-Sequences_fastqc
                     KO-20-4-Sequences.txt.gz_trimmed_fastqc
                     KO-20-5-Sequences_fastqc
                     KO-20-6-Sequences.txt.gz_trimmed_fastqc
                     KO-24-1-Sequences_fastqc
                     KO-24-2-Sequences.txt.gz_trimmed_fastqc
                     KO-24-3-Sequences_fastqc
                     KO-24-4-Sequences.txt.gz_trimmed_fastqc
                     KO-24-5-Sequences_fastqc
                     KO-24-6-Sequences.txt.gz_trimmed_fastqc
                     KO-28-1-Sequences_fastqc
                     KO-28-2-Sequences.txt.gz_trimmed_fastqc
                     KO-28-3-Sequences_fastqc
                     KO-28-4-Sequences.txt.gz_trimmed_fastqc
                     KO-28-5-Sequences_fastqc
                     KO-28-6-Sequences.txt.gz_trimmed_fastqc
                     KO-32-1-Sequences_fastqc
                     KO-32-2-Sequences.txt.gz_trimmed_fastqc
                     KO-32-3-Sequences_fastqc
                     KO-32-4-Sequences.txt.gz_trimmed_fastqc
                     KO-32-5-Sequences_fastqc
                     KO-32-6-Sequences.txt.gz_trimmed_fastqc
                     WT-12-1-Sequences_fastqc
                     WT-12-2-Sequences.txt.gz_trimmed_fastqc
                     WT-12-3-Sequences_fastqc
                     WT-12-4-Sequences.txt.gz_trimmed_fastqc
                     WT-12-5-Sequences_fastqc
                     WT-12-6-Sequences.txt.gz_trimmed_fastqc
                     WT-16-1-Sequences_fastqc
                     WT-16-2-Sequences.txt.gz_trimmed_fastqc
                     WT-16-3-Sequences_fastqc
                     WT-16-4-Sequences.txt.gz_trimmed_fastqc
                     WT-16-5-Sequences_fastqc
                     WT-16-6-Sequences.txt.gz_trimmed_fastqc
                     WT-20-1-Sequences_fastqc
                     WT-20-2-Sequences.txt.gz_trimmed_fastqc
                     WT-20-3-Sequences_fastqc
                     WT-20-4-Sequences.txt.gz_trimmed_fastqc
                     WT-20-5-Sequences_fastqc
                     WT-20-6-Sequences.txt.gz_trimmed_fastqc
                     WT-24-1-Sequences_fastqc
                     WT-24-2-Sequences.txt.gz_trimmed_fastqc
                     WT-24-3-Sequences_fastqc
                     WT-24-4-Sequences.txt.gz_trimmed_fastqc
                     WT-24-5-Sequences_fastqc
                     WT-24-6-Sequences.txt.gz_trimmed_fastqc
                     WT-28-1-Sequences_fastqc
                     WT-28-2-Sequences.txt.gz_trimmed_fastqc
                     WT-28-3-Sequences_fastqc
                     WT-28-4-Sequences.txt.gz_trimmed_fastqc
                     WT-28-5-Sequences_fastqc
                     WT-28-6-Sequences.txt.gz_trimmed_fastqc
                     WT-32-1-Sequences_fastqc
                     WT-32-2-Sequences.txt.gz_trimmed_fastqc
                     WT-32-3-Sequences_fastqc
                     WT-32-4-Sequences.txt.gz_trimmed_fastqc
                     WT-32-5-Sequences_fastqc
                     WT-32-6-Sequences.txt.gz_trimmed_fastqc

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