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4R023-L4-P2-TTAGGC-Sequences.txt.gz_trimmed.txt FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L4-P2-TTAGGC-Sequences.txt.gz_trimmed.txt

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L4-P2-TTAGGC-Sequences.txt.gz_trimmed.txt
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39079614
Sequences flagged as poor quality0
Sequence length60-100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT140150.014.9126221
TCGAATG83250.013.0591832
CTCGTTT138050.012.6275421
CGAATGT84450.012.59616853
CGCATAT28300.012.2534271
CTCGATT68000.011.7152691
CTCAAAT302150.011.2907041
CTCGTAT78650.011.0226321
CTCGGTT122100.010.9764681
CGCGTTT22200.010.9764681
CGCGTAA17150.010.9296981
CTCCGAT115150.010.4994861
CTCAGAT275150.010.4741281
CTCGGAT175300.010.2115981
ACGATAC40500.010.1986660-61
TCGACCG29550.09.98752926-27
CTGGATT325650.09.7276481
CGCTAAT19800.09.7035561
CTCATTT356650.09.6573361
CGATAAC36900.09.6516051
Produced by FastQC (version 0.11.5)