Basic Statistics
Measure | Value |
---|---|
Filename | 4R023-L3-P05-CAGATC-Sequences.txt.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 40087754 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGAAT | 14865 | 0.0 | 13.348814 | 1 |
GTCGGTT | 7435 | 0.0 | 12.038556 | 1 |
TCGAATG | 8490 | 0.0 | 11.958009 | 2 |
CTCGTTT | 14360 | 0.0 | 11.773549 | 1 |
CTCAAAT | 31320 | 0.0 | 11.506851 | 1 |
TATGCCG | 5475 | 0.0 | 11.328858 | 44-45 |
CTCGATT | 7255 | 0.0 | 11.22754 | 1 |
TCGTATG | 7370 | 0.0 | 10.8706 | 42-43 |
CGCATAT | 3335 | 0.0 | 10.792233 | 1 |
CCGCTAT | 2650 | 0.0 | 10.722571 | 1 |
CTCCGAT | 12800 | 0.0 | 10.618558 | 1 |
CGCGTAA | 900 | 3.8198777E-11 | 10.524006 | 1 |
CGAATGT | 9475 | 0.0 | 9.970792 | 3 |
CTCAATT | 19635 | 0.0 | 9.720033 | 1 |
CTCAGTT | 30030 | 0.0 | 9.698696 | 1 |
CTCATTT | 36850 | 0.0 | 9.600121 | 1 |
CTCGGAT | 19020 | 0.0 | 9.586141 | 1 |
GTCGTTT | 10810 | 0.0 | 9.462843 | 1 |
CTTTATT | 36660 | 0.0 | 9.391512 | 1 |
TCGGTTT | 10830 | 0.0 | 9.330885 | 2 |