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4R023-L2-P11-TTAGGC-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L2-P11-TTAGGC-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L2-P11-TTAGGC-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39823607
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT161700.014.9428531
CGAATGT91550.013.1424853
TCGAATG85300.012.8931932
CGCTAAT34700.012.4490921
CTCGTTT145550.012.2631311
CGCTATT29050.012.2557761
CTCGATT56100.012.1003781
CTCAAAT321000.011.7419771
CTCCGAT115100.011.71301651
CGATCCG46750.011.11111278-79
TCGACCG45850.010.811439526-27
CGCGTAA30550.010.72171
CTCGTAT92100.010.3085151
ACGATAC46200.010.22331760-61
CTCGGAT182200.010.1611291
CGCATAT28500.010.16039851
CCGCTAT35250.010.1001511
CCGACAT71100.010.0816841
CGATTAG67500.09.9569414
CTCATTT365900.09.8989211
Produced by FastQC (version 0.11.5)