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4R023-L4-P6-GATCAG-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L4-P6-GATCAG-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L4-P6-GATCAG-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35519600
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT133100.013.2567321
TCGAATG72300.012.3525282
GTCGGTT69500.011.8750671
CTCGTTT134350.011.8271121
CTCCGAT112200.011.4141221
TTACGCG3400.001282863311.0560648
CGCTAAT18500.011.0247391
CCGGGAT91250.010.9678421
CGCATAT28850.010.522181
CTCGTAT84800.010.3477871
CGAATGT84600.010.2787873
CTCAAAT281250.010.1694241
CGCGTTT20400.09.9979251
CCGGTAT46500.09.8944211
CTCGATT64100.09.8415891
CTCAATT171050.09.788661
CTGGAAT364450.09.6048371
CTCATTT327650.09.5978721
CCGGTTT82800.09.5666031
CTCGGAT173100.09.5631281
Produced by FastQC (version 0.11.5)