Worg
4R023-L4-P5-CAGATC-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L4-P5-CAGATC-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L4-P5-CAGATC-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43186284
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT159300.012.4472721
CTCGTTT159650.011.7663011
CGCGTAA6553.0213414E-911.5875691
TCGAATG84150.011.3950192
GTCGGTT85250.011.2957571
CTCCGAT142450.011.188981
CTCGATT80700.011.0509091
CTCAAAT330150.010.6899411
CCGGTAT56950.010.41190051
CGCTAAT22650.010.0527931
CCGCTAT28550.09.9691661
GTCGTTT115050.09.9367451
CTCGTAT98750.09.89563751
CGATTAG69450.09.8813334
CTCGGTT151650.09.8220221
CGAATGT98400.09.7925943
CTCATTT390500.09.6330951
TCGGTTT125400.09.5208382
CCGGGAT111850.09.5000461
CCCGAAT89950.09.4925971
Produced by FastQC (version 0.11.5)