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4R023-L3-P11-TAGCTT-Sequences.txt.gz_trimmed.txt FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P11-TAGCTT-Sequences.txt.gz_trimmed.txt

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P11-TAGCTT-Sequences.txt.gz_trimmed.txt
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42717202
Sequences flagged as poor quality0
Sequence length60-100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT155550.015.17935851
TCGAATG88300.012.6273492
CTCAAAT337150.012.5197171
CTCGTTT155250.012.0402141
CGCTATT31900.011.8956231
CTCGATT73750.011.6882281
CGCGTAA20800.011.4868181
CGAATGT90200.011.3745323
CGCATAT36550.011.151281
CTCCGAT126650.011.1340751
CTCAATT220100.010.3657761
CGATAAC40800.010.2193371
GTCGGTT72950.010.2109161
CTGGAAT433150.010.19920351
CTCGGAT195150.010.1066311
CGCAATT28300.010.09802151
CTCATTT388300.09.7484791
CTTGAAT348350.09.696441
TCGACCG37900.09.63974226-27
CGCGTTT21450.09.6098861
Produced by FastQC (version 0.11.5)