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4R023-L4-P7-ATGTCA-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L4-P7-ATGTCA-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L4-P7-ATGTCA-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40321706
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT152750.013.7559461
TCGAATG82050.012.8898022
CTCGTTT150350.012.4612491
CGCGATT12150.012.1018951
CTCCGAT129450.011.5052371
CTCAAAT308900.011.5009021
CGCGTAA7201.1150405E-911.1991321
CTCGTAT86950.011.1282921
GTCGGTT77700.011.0490651
CGAATGT91600.010.6222663
CTCGGAT192150.010.3428821
CCCGAAT84950.010.1060911
CTCGATT70650.010.0032711
GTCGTTT109550.09.5685881
TCGTTTT172750.09.5234062
CTCGGTT134550.09.48281
CTCAGAT276550.09.3817021
CGCTAAT21800.09.3557781
CGCTATT19450.09.2668471
CTCATTT360000.09.1964651
Produced by FastQC (version 0.11.5)