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4R023-L4-P8-GTGAAA-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L4-P8-GTGAAA-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L4-P8-GTGAAA-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42177411
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT149300.014.4563951
TCGACCG45850.013.16913326-27
CGCGTAA31200.012.7712421
CTCGTTT158800.012.2772131
CTCGATT70850.011.7836891
CTCAAAT335400.011.7670791
TCGAATG97400.011.3406862
CGAATGT94100.011.2388863
CGATCCG54400.011.19009378-79
CGCGTTT23250.011.0174041
CTCATTT389250.010.797261
CTCCGAT127650.010.553731
CTCAATT217050.010.4247841
GTTCGAC59250.010.38907424-25
GTCGGTT74750.010.3439121
CTCGGAT190950.010.2846411
CGCATAT32800.010.26816751
CTCGTAT90650.010.2041141
CCGGTTT87250.010.0037041
CTCGTCT179650.09.9809771
Produced by FastQC (version 0.11.5)