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4R019-L5-P4-GCCAAT-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R019-L5-P4-GCCAAT-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R019-L5-P4-GCCAAT-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65341606
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAATG146100.015.0464712
CTCGAAT279750.014.7524781
CGCGTAA19850.013.9711471
CGAATGT164750.013.2573
CTCAAAT512900.012.3170621
ACGATAC79450.012.00174760-61
CTCGTTT253250.011.6560331
CCGCTAT50800.011.5660971
CTCGGAT324400.011.3019731
GTCGGTT136050.010.8830981
CTCCGAT201750.010.4843021
CGCTATT42350.010.3221481
TCGTTTT311950.010.0283212
CTCAATT301900.09.9801131
CGCATAT48700.09.8449111
CGCTAAT53400.09.7706231
CGGGAAT114450.09.6514511
CCCGAAT130100.09.6104761
CATACGA95400.09.55205256-57
CTCATTT590000.09.5443291
Produced by FastQC (version 0.11.5)