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4R023-L3-P04-GCCAAT-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Sat 15 Apr 2017
4R023-L3-P04-GCCAAT-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R023-L3-P04-GCCAAT-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39472397
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG88050.013.84857942-43
CTCGAAT143950.013.25816251
TATGCCG68550.011.96147244-45
TCGAATG78850.011.6831362
CTCGTTT143650.011.3407751
CTCAAAT302950.011.0832011
CGCATAT30300.010.9407061
CTCGGTT127100.010.39557651
CTCCGAT128900.010.3238891
CTCGATT73450.010.3161611
TATCTCG109300.010.18876538-39
GTCGGTT76050.09.8389291
CGAATGT88000.09.8274363
CGCATAA29050.09.6182441
CTCATAT167800.09.5674831
CTCGGAT186800.09.405611
GTATGCC137750.09.22725144-45
ATGCCGT134200.09.22681846-47
CTCCGTT129250.09.1967221
CCGGTTT87200.09.0696361
Produced by FastQC (version 0.11.5)