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4R024-L5-P9-ATGTCA-Sequences.txt.gz FastQC Report
FastQCFastQC Report
Mon 17 Apr 2017
4R024-L5-P9-ATGTCA-Sequences.txt.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4R024-L5-P9-ATGTCA-Sequences.txt.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41066793
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT101450.011.903811
CCCGAAT85450.011.8604051
CTCGAAT184050.011.5533611
CTCCGAT130250.011.3442221
TCGAATG89550.011.3336242
CCCGTAT56850.010.9128621
GTCGGTT95000.010.8176761
CTCGTTT159150.010.8018431
CCGCTAT34050.010.7095551
CTCAAAT327800.010.4887921
GTCGTTT128150.010.458411
CTCGGAT214750.010.2104681
CGAATGT106250.010.17118553
CTCGTCT196100.09.9498711
CCCGTTT105300.09.8944611
TCGGTTT120700.09.8490392
CGATTAG69150.09.7844314
ACGATAC47200.09.7094360-61
CTCGATT61050.09.5415141
CCGGTTT100850.09.48578551
Produced by FastQC (version 0.11.5)