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26688_ID1144_8_S16_L004_R1_001.fastq.gz FastQC Report
FastQCFastQC Report
Sat 1 Dec 2018
26688_ID1144_8_S16_L004_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename26688_ID1144_8_S16_L004_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14631527
Sequences flagged as poor quality0
Sequence length125
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGTGC102150.030.6981721
TCCGATC95200.025.9831927
TTCCGAT100050.025.1422756
CCGATCT105200.023.454448
TCTTCCG151700.020.5693728
CGATCTA27800.019.330269
CTTCCGA167800.018.3886059
CGATCTC52400.017.4230969
GTGTGCT189200.016.6826112
GTGCTCT203750.015.4344394
CGTTGAT22900.015.1869091
TGTGCTC211900.014.9228013
TAATCGT13600.012.7860371
CGATCTG55550.012.6903989
TGCTCTT258050.012.3662035
GCTCTTC298800.010.7797096
TCGTTGA18350.010.4151744
CGATCTT36350.09.8556839
ATATCGG35700.09.22341528-29
CGGAATT54350.09.0574932
Produced by FastQC (version 0.11.5)