Basic Statistics
Measure | Value |
---|---|
Filename | 26688_ID1144_8_S16_L004-R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14631527 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTGGGCAAGTGAGCTTTTTAGTTTGTGTCGGAAGCCTGTAATTACGGCTC | 16371 | 0.11188852674092048 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTGTGC | 13195 | 0.0 | 46.17753 | 1 |
TCTTCCG | 18625 | 0.0 | 32.15096 | 8 |
CTTCCGA | 20300 | 0.0 | 28.50173 | 9 |
GTGTGCT | 21770 | 0.0 | 28.334364 | 2 |
GTGCTCT | 21510 | 0.0 | 28.192528 | 4 |
ATTACGG | 5420 | 0.0 | 26.731487 | 40-41 |
TGTGCTC | 22815 | 0.0 | 26.555124 | 3 |
TCCGATC | 12150 | 0.0 | 23.593964 | 10-11 |
CGGAATA | 5985 | 0.0 | 22.527082 | 4 |
CCGATCT | 12845 | 0.0 | 22.360104 | 12-13 |
TTACGGC | 5455 | 0.0 | 22.328266 | 42-43 |
GCGGAAT | 6190 | 0.0 | 21.407549 | 3 |
TGCTCTT | 29090 | 0.0 | 21.085228 | 5 |
TTCCGAT | 14100 | 0.0 | 20.57666 | 10-11 |
CCCCCGT | 4230 | 0.0 | 20.24571 | 1 |
CGATCTA | 1850 | 0.0 | 19.97207 | 12-13 |
AATTACG | 6365 | 0.0 | 19.135187 | 40-41 |
GTCGGAA | 7825 | 0.0 | 18.775372 | 26-27 |
CTATACT | 8170 | 0.0 | 18.14913 | 68-69 |
GTGTCGG | 8370 | 0.0 | 17.966967 | 24-25 |