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26686_ID1144_6_S53_L006-R2_001.fastq.gz FastQC Report
FastQCFastQC Report
Sat 1 Dec 2018
26686_ID1144_6_S53_L006-R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename26686_ID1144_6_S53_L006-R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9879929
Sequences flagged as poor quality0
Sequence length125
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC61400.027.4904357
ATTACGG33400.026.98086440-41
CCGATCT65000.025.7851898
TTCCGAT71950.023.1459056
CGTGTGC66600.022.7920741
TTACGGC33750.021.8233742-43
CCCCCGT27150.018.5654831
CGGGGGA67500.018.5398751
CTATACT50350.018.46895268-69
CGTAACG10000.018.19651640-41
GCGGAAT37050.018.139833
TAATTAC51000.018.12275538-39
AATTACG40700.018.09645340-41
GTCGGAA51750.017.92095826-27
CGGAATA36200.017.7641624
GGCAAGT90550.017.3384864
CGGGGGG94550.017.0349181
GGGGGTA92150.016.9756031
CGATCTA11750.016.7233989
GTGTCGG57250.016.50224-25
Produced by FastQC (version 0.11.5)