Basic Statistics
Measure | Value |
---|---|
Filename | 26686_ID1144_6_S14_L004-R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15161508 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCCGATC | 9445 | 0.0 | 28.27324 | 7 |
ATTACGG | 4655 | 0.0 | 26.250586 | 40-41 |
CCGATCT | 10335 | 0.0 | 25.388968 | 8 |
TTCCGAT | 11265 | 0.0 | 23.611935 | 6 |
CGTGTGC | 10540 | 0.0 | 23.028273 | 1 |
CCCCCGT | 4505 | 0.0 | 22.631107 | 1 |
CGGAATA | 5530 | 0.0 | 21.997654 | 4 |
TTACGGC | 4625 | 0.0 | 21.98757 | 42-43 |
GCGGAAT | 5820 | 0.0 | 19.80756 | 3 |
CGGGCTA | 2660 | 0.0 | 18.510801 | 1 |
CGGGGTG | 12850 | 0.0 | 17.986958 | 1 |
AATTACG | 5775 | 0.0 | 17.858072 | 40-41 |
CGGGGGA | 10935 | 0.0 | 17.746552 | 1 |
GGGGGTA | 14640 | 0.0 | 17.568304 | 1 |
CGATCTA | 2010 | 0.0 | 17.539867 | 9 |
TAATTAC | 7665 | 0.0 | 16.544794 | 38-39 |
TCTTCCG | 16205 | 0.0 | 16.51487 | 4 |
GTCGGAA | 7645 | 0.0 | 16.475346 | 26-27 |
CTATACT | 7690 | 0.0 | 16.315296 | 68-69 |
CGGGGGG | 14435 | 0.0 | 16.172464 | 1 |